| Genus/Species | Common Name | Image |
| Acerodon celebensis | Sulawesi Fruit Bat |  |
| Acerodon humilis | Talaud Fruit Bat |  |
| Acerodon jubatus | Golden-capped Fruit Bat |  |
| Acerodon leucotis | Palawan Fruit Bat |  |
| Acerodon mackloti | Sunda Fruit Bat |  |
| Aethalops aequalis | Borneo Fruit Bat |  |
| Aethalops alecto | Pygmy Fruit Bat |  |
| Alionycteris paucidentata | Mindanao Pygmy Fruit Bat |  |
| Aproteles bulmerae | Bulmer's Fruit Bat |  |
| Balionycteris maculata | Spotted-winged Fruit Bat |  |
| Balionycteris seimundi | Malayan Spotted-winged Fruit Bat |  |
| Boneia bidens | Manado Fruit Bat |  |
| Casinycteris argynnis | Short-palated Fruit Bat |  |
| Casinycteris campomaanensis | Campo-Ma'an Fruit Bat |  |
| Casinycteris ophiodon | Pohle's Fruit Bat |  |
| Chironax melanocephalus | Black-capped Fruit Bat |  |
| Chironax tumulus | Sulawesi Black-capped Fruit Bat | |
| Cynopterus brachyotis | Lesser Short-nosed Fruit Bat |  |
| Cynopterus horsfieldi | Horsfield's Fruit Bat |  |
| Cynopterus luzoniensis | Peters's Fruit Bat |  |
| Cynopterus minutus | Minute Fruit Bat |  |
| Cynopterus nusatenggara | Nusatenggara Short-nosed Fruit Bat |  |
| Cynopterus sphinx | Greater Short-nosed Fruit Bat |  |
| Cynopterus titthaecheilus | Indonesian Short-nosed Fruit Bat |  |
| Desmalopex leucopterus | White-winged Flying Fox |  |
| Desmalopex microleucopterus | Small White-winged Flying Fox |  |
| Dobsonia anderseni | Andersen's Naked-backed Fruit Bat |  |
| Dobsonia beauforti | Beaufort's Naked-backed Fruit Bat |  |
| Dobsonia chapmani | Negros Naked-backed Fruit Bat |  |
| Dobsonia crenulata | Halmahera Naked-backed Fruit Bat |  |
| Dobsonia emersa | Biak Naked-backed Fruit Bat |  |
| Dobsonia exoleta | Sulawesi Naked-backed Fruit Bat |  |
| Dobsonia inermis | Solomons Naked-backed Fruit Bat |  |
| Dobsonia magna | New Guinea Naked-backed Fruit Bat |  |
| Dobsonia minor | Lesser Naked-backed Fruit Bat |  |
| Dobsonia moluccensis | Moluccan Naked-backed Fruit Bat |  |
| Dobsonia pannietensis | Panniet Naked-backed Fruit Bat |  |
| Dobsonia peroni | Western Naked-backed Fruit Bat |  |
| Dobsonia praedatrix | New Britain Naked-backed Fruit Bat | |
| Dobsonia viridis | Greenish Naked-backed Fruit Bat |  |
| Dyacopterus brooksi | Brooks' Dyak Fruit Bat | |
| Dyacopterus rickarti | Rickart's Dyak Fruit Bat |  |
| Dyacopterus spadiceus | Dyak Fruit Bat |  |
| Eidolon dupreanum | Madagascan Fruit Bat |  |
| Eidolon helvum | Straw-coloured Fruit Bat |  |
| Eonycteris major | Greater Dawn Bat |  |
| Eonycteris robusta | Phillipine Dawn Bat |  |
| Eonycteris spelaea | Lesser Dawn Bat |  |
| Epomophorus angolensis | Angolan Epauletted Fruit Bat |  |
| Epomophorus anselli | Ansell's Epauletted Fruit Bat |  |
| Epomophorus crypturus | Peters' Epauletted Fruit Bat |  |
| Epomophorus dobsoni | Dobson's Fruit Bat |  |
| Epomophorus gambianus | Gambian Epauletted Fruit Bat |  |
| Epomophorus grandis | Lesser Angolan Epauletted Fruit Bat |  |
| Epomophorus intermedius | Hayman's Dwarf Epauletted Fruit Bat | |
| Epomophorus labiatus | Ethiopian Epauletted Fruit Bat |  |
| Epomophorus minimus | East African Epauletted Fruit Bat |  |
| Epomophorus minor | Minor Epauletted Fruit Bat |  |
| Epomophorus pusillus | Peters's Dwarf Epauletted Fruit Bat |  |
| Epomophorus wahlbergi | Wahlberg's Epauletted Fruit Bat |  |
| Epomops buettikoferi | Buettikofer's Epauletted Bat |  |
| Epomops franqueti | Franquet's Epauletted Bat |  |
| Haplonycteris fischeri | Philippine Pygmy Fruit Bat |  |
| Harpyionycteris celebensis | Sulawesi Harpy Fruit Bat |  |
| Harpyionycteris whiteheadi | Harpy Fruit Bat |  |
| Hypsignathus monstrosus | Hammer-headed Fruit Bat |  |
| Latidens salimalii | Salim Ali's Fruit Bat |  |
| Lissonycteris angolensis | Angolan Rousette |  |
| Macroglossus minimus | Lesser Long-tongued Fruit Bat |  |
| Macroglossus sobrinus | Greater Long-tongued Fruit Bat |  |
| Megaerops ecaudatus | Temminck's Tailless Fruit Bat |  |
| Megaerops kusnotoi | Javan Tailless Fruit Bat |  |
| Megaerops niphanae | Ratanaworabhan's Fruit Bat |  |
| Megaerops wetmorei | White-collared Fruit Bat |  |
| Megaloglossus azagnyi | Western Woermann's Fruit Bat |  |
| Megaloglossus woermanni | Woermann's Bat |  |
| Melonycteris aurantius | Orange Fruit Bat | |
| Melonycteris melanops | Black-bellied Fruit Bat |  |
| Mirimiri acrodonta | Fijian Monkey-faced Bat |  |
| Myonycteris brachycephala | Sao Tom Collared Fruit Bat |  |
| Myonycteris leptodon | Sierra Leone Collared Fruit Bat |  |
| Myonycteris relicta | East African Little Collared Fruit Bat |  |
| Myonycteris torquata | Little Collared Fruit Bat |  |
| Nanonycteris veldkampi | Veldkamp's Bat |  |
| Neopteryx frosti | Small-toothed Fruit Bat |  |
| Nesonycteris fardoulisi | Fardoulis's Blossom Bat |  |
| Nesonycteris woodfordi | Woodford's Fruit Bat |  |
| Notopteris macdonaldi | Long-tailed Fruit Bat |  |
| Notopteris neocaledonica | New Caledonia Long-tailed Fruit Bat |  |
| Nyctimene aello | Broad-striped Tube-nosed Fruit Bat |  |
| Nyctimene albiventer | Common Tube-nosed Fruit Bat |  |
| Nyctimene cephalotes | Pallas's Tube-nosed Fruit Bat |  |
| Nyctimene certans | Mountain Tube-nosed Fruit Bat |  |
| Nyctimene cyclotis | Round-eared Tube-nosed Fruit Bat |  |
| Nyctimene draconilla | Dragon Tube-nosed Fruit Bat |  |
| Nyctimene keasti | Keast Tube-nosed Fruit Bat |  |
| Nyctimene major | Island Tube-nosed Fruit Bat |  |
| Nyctimene malaitensis | Malaita Tube-nosed Fruit Bat |  |
| Nyctimene masalai | Demonic Tube-nosed Fruit Bat | |
| Nyctimene minutus | Lesser Tube-nosed Fruit Bat | |
| Nyctimene rabori | Philippine Tube-nosed Fruit Bat |  |
| Nyctimene robinsoni | Queensland Tube-nosed Fruit Bat |  |
| Nyctimene sanctacrucis | Nendo Tube-nosed Fruit Bat |  |
| Nyctimene vizcaccia | Umboi Tube-nosed Fruit Bat |  |
| Otopteropus cartilagonodus | Luzon Fruit Bat |  |
| Paranyctimene raptor | Unstriped Tube-nosed Bat |  |
| Paranyctimene tenax | Nijhoff's Tube-nosed Bat | |
| Penthetor lucasi | Lucas's Short-nosed Fruit Bat |  |
| Plerotes anchietai | D'anchieta's Fruit Bat |  |
| Ptenochirus jagori | Greater Musky Fruit Bat |  |
| Ptenochirus minor | Lesser Musky Fruit Bat |  |
| Ptenochirus wetmorei | Mindanao Musky Fruit Bat | |
| Pteralopex acrodonta | Fijian Monkey-faced Bat |  |
| Pteralopex anceps | Bougainville Monkey-faced Bat |  |
| Pteralopex atrata | Guadalcanal Monkey-faced Bat |  |
| Pteralopex pulchra | Montane Monkey-faced Bat | |
| Pteralopex taki | New Georgian Monkey-faced Bat |  |
| Pteropus admiralitatum | Admiralty Flying Fox |  |
| Pteropus aldabrensis | Aldabra Flying Fox |  |
| Pteropus alecto | Black Flying Fox |  |
| Pteropus allenorum | Small Samoan Flying Fox | |
| Pteropus anetianus | Vanauatu Flying Fox |  |
| Pteropus aruensis | Aru Flying Fox |  |
| Pteropus brunneus | Dusky Flying Fox |  |
| Pteropus caniceps | North Moluccan Flying Fox |  |
| Pteropus capistratus | Bismark Masked Flying Fox |  |
| Pteropus chrysoproctus | Moluccan Flying Fox |  |
| Pteropus cognatus | Makira Flying Fox |  |
| Pteropus conspicillatus | Spectacled Flying Fox |  |
| Pteropus coxi | Large Samoan Flying Fox | |
| Pteropus dasymallus | Ryukyu Flying Fox |  |
| Pteropus faunulus | Nicobar Flying Fox |  |
| Pteropus fundatus | Banks Flying Fox |  |
| Pteropus gilliardi | Gilliard's Flying Fox | |
| Pteropus griseus | Grey Flying Fox |  |
| Pteropus howensis | Ontong Java Flying Fox | |
| Pteropus hypomelanus | Variable Flying Fox |  |
| Pteropus keyensis | Kei Flying Fox |  |
| Pteropus livingstonii | Comoro Black Flying Fox |  |
| Pteropus lombocensis | Lombok Flying Fox |  |
| Pteropus lylei | Lyle's Flying Fox |  |
| Pteropus macrotis | Big-eared Flying Fox |  |
| Pteropus mahaganus | Sanborn's Flying Fox |  |
| Pteropus mariannus | Marianas Flying Fox |  |
| Pteropus medius | Indian Flying Fox |  |
| Pteropus melanopogon | Black-bearded Flying Fox |  |
| Pteropus melanotus | Black-eared Flying Fox |  |
| Pteropus molossinus | Caroline Flying Fox |  |
| Pteropus neohibernicus | Great Flying Fox |  |
| Pteropus niger | Greater Mascarene Flying Fox |  |
| Pteropus nitendiensis | Temotu Flying Fox |  |
| Pteropus ocularis | Ceram Flying Fox |  |
| Pteropus ornatus | Ornate Flying Fox |  |
| Pteropus pelagicus | Chuuk Flying Fox |  |
| Pteropus pelewensis | Pelew Flying Fox |  |
| Pteropus personatus | Masked Flying Fox |  |
| Pteropus pilosus | Large Palau Flying Fox |  |
| Pteropus pohlei | Geelvink Bay Flying Fox |  |
| Pteropus poliocephalus | Grey-headed Flying Fox |  |
| Pteropus pselaphon | Bonin Flying Fox |  |
| Pteropus pumilus | Little Golden-mantled Flying Fox |  |
| Pteropus rayneri | Solomons Flying Fox |  |
| Pteropus rennelli | Rennell Flying Fox |  |
| Pteropus rodricensis | Rodriguez Flying Fox |  |
| Pteropus rufus | Madagascan Flying Fox |  |
| Pteropus samoensis | Samoan Flying Fox |  |
| Pteropus scapulatus | Little Red Flying Fox |  |
| Pteropus seychellensis | Seychelles Flying Fox |  |
| Pteropus speciosus | Philippine Grey Flying Fox |  |
| Pteropus subniger | Dark Flying Fox |  |
| Pteropus temmincki | Temminck's Flying Fox |  |
| Pteropus tokudae | Guam Flying Fox |  |
| Pteropus tonganus | Pacific Flying Fox |  |
| Pteropus tuberculatus | Vanikoro Flying Fox |  |
| Pteropus ualanus | Kosrae Flying Fox |  |
| Pteropus vampyrus | Large Flying Fox |  |
| Pteropus vetulus | New Caledonia Flying Fox |  |
| Pteropus voeltzkowi | Pemba Flying Fox |  |
| Pteropus woodfordi | Dwarf Flying Fox |  |
| Rousettus aegyptiacus | Egyptian Rousette |  |
| Rousettus amplexicaudatus | Geoffroy's Rousette |  |
| Rousettus celebensis | Sulawesi Rousette |  |
| Rousettus leschenaulti | Leschenault's Rousette |  |
| Rousettus linduensis | Linduan Rousette |  |
| Rousettus madagascariensis | Madagascan Rousette |  |
| Rousettus obliviosus | Comoro Rousette |  |
| Rousettus spinalatus | Bare-backed Rousette |  |
| Scotonycteris bergmansi | Bergmans's Fruit Bat |  |
| Scotonycteris occidentalis | Hayman's Tear-drop Fruit Bat |  |
| Scotonycteris zenkeri | Zenker's Fruit Bat |  |
| Sphaerias blanfordi | Blanford's Fruit Bat |  |
| Stenonycteris lanosus | Long-haired Rousette |  |
| Styloctenium mindorensis | Mindoro Stripe-faced Fruit Bat |  |
| Styloctenium wallacei | Stripe-faced Fruit Bat |  |
| Syconycteris australis | Southern Blossom Bat |  |
| Syconycteris carolinae | Halmahera Blossom Bat | |
| Syconycteris hobbit | Moss-forest Blossom Bat |  |
| Thoopterus nigrescens | Swift Fruit Bat |  |
| Thoopterus suhaniahae | Suhaniah Fruit Bat |  |
| Genus/Species | Common Name | Image |
| Rhinolophus achilles | Queensland Horseshoe Bat |  |
| Rhinolophus acuminatus | Acuminate Horseshoe Bat |  |
| Rhinolophus adami | Adam's Horseshoe Bat |  |
| Rhinolophus affinis | Intermediate Horseshoe Bat |  |
| Rhinolophus alcyone | Halcyon Horseshoe Bat |  |
| Rhinolophus alticolus | Cameroon Horseshoe Bat | |
| Rhinolophus andamanensis | Homfray's Horseshoe Bat |  |
| Rhinolophus arcuatus | Arcuate Horseshoe Bat |  |
| Rhinolophus beddomei | Bedomme's Horseshoe Bat |  |
| Rhinolophus belligerator | Poso Horseshoe Bat | |
| Rhinolophus blasii | Blasius's Horseshoe Bat |  |
| Rhinolophus bocharicus | Central Asian Horseshoe Bat |  |
| Rhinolophus borneensis | Bornean Horseshoe Bat |  |
| Rhinolophus canuti | Canut's Horseshoe Bat |  |
| Rhinolophus capensis | Cape Horseshoe Bat |  |
| Rhinolophus celebensis | Sulawesi Horseshoe Bat |  |
| Rhinolophus chiewkweeae | Chiewkwee's Horseshoe Bat |  |
| Rhinolophus chaseni | Indochinese Horseshoe Bat |  |
| Rhinolophus clivosus | Geoffroy's Horseshoe Bat |  |
| Rhinolophus coelophyllus | Croslet Horseshoe Bat |  |
| Rhinolophus cognatus | Andaman Horseshoe Bat |  |
| Rhinolophus coheni | Cohen's Horseshoe Bat | |
| Rhinolophus convexus | Convex Horseshoe Bat |  |
| Rhinolophus cornutus | Little Japanese Horseshoe Bat |  |
| Rhinolophus creaghi | Creagh's Horseshoe Bat |  |
| Rhinolophus damarensis | Damara Horseshoe Bat |  |
| Rhinolophus darlingi | Darling's Horseshoe Bat |  |
| Rhinolophus deckenii | Decken's Horseshoe Bat |  |
| Rhinolophus denti | Dent's Horseshoe Bat |  |
| Rhinolophus eloquens | Eloquent Horseshoe Bat |  |
| Rhinolophus episcopus | Allen's Horseshoe Bat | |
| Rhinolophus euryale | Mediterranean Horseshoe Bat |  |
| Rhinolophus euryotis | Broad-eared Horseshoe Bat |  |
| Rhinolophus ferrumequinum | Greater Horseshoe Bat |  |
| Rhinolophus formosae | Formosan Woolly Horseshoe Bat |  |
| Rhinolophus francisi | Francis' Woolly Horseshoe Bat |  |
| Rhinolophus fumigatus | Ruppell's Horseshoe Bat |  |
| Rhinolophus gorongosae | Gorongosa Horseshoe Bat |  |
| Rhinolophus guineensis | Guinean Horseshoe Bat |  |
| Rhinolophus hildebrandti | Hildebrandt's Horseshoe Bat |  |
| Rhinolophus hilli | Hill's Horseshoe Bat |  |
| Rhinolophus hillorum | Upland Horseshoe Bat |  |
| Rhinolophus hipposideros | Lesser Horseshoe Bat |  |
| Rhinolophus horaceki | Hor cek's Horseshoe Bat |  |
| Rhinolophus huananus | Chinese Horseshoe Bat |  |
| Rhinolophus inops | Philippine Forest Horseshoe Bat |  |
| Rhinolophus kahuzi | Kahuzi Horseshoe Bat |  |
| Rhinolophus keyensis | Insular Horseshoe Bat |  |
| Rhinolophus landeri | Lander's Horseshoe Bat |  |
| Rhinolophus lepidus | Blyth's Horseshoe Bat |  |
| Rhinolophus lobatus | Peters' Horseshoe Bat |  |
| Rhinolophus luctoides | Selangor Woolly Horseshoe Bat |  |
| Rhinolophus luctus | Woolly Horseshoe Bat |  |
| Rhinolophus mabuensis | Mount Mabu Horseshoe Bat |  |
| Rhinolophus maclaudi | Maclaud's Horseshoe Bat |  |
| Rhinolophus macrotis | Big-eared Horseshoe Bat |  |
| Rhinolophus madurensis | Madura Horseshoe Bat | |
| Rhinolophus maendeleo | Maendeleo Horseshoe Bat |  |
| Rhinolophus malayanus | Malayan Horseshoe Bat |  |
| Rhinolophus marshalli | Marshall's Horseshoe Bat |  |
| Rhinolophus mcintyrei | McIntyre's Horseshoe Bat | |
| Rhinolophus megaphyllus | Smaller Horseshoe Bat |  |
| Rhinolophus mehelyi | Mehely's Horseshoe Bat |  |
| Rhinolophus microglobosus | Unspecified |  |
| Rhinolophus mitratus | Mitred Horseshoe Bat |  |
| Rhinolophus monoceros | Formosan Lesser Horseshoe Bat |  |
| Rhinolophus montanus | Timorese Horseshoe Bat |  |
| Rhinolophus monticolus | Mountain Horseshoe Bat |  |
| Rhinolophus morio | Malaysian Woolly Horseshoe Bat |  |
| Rhinolophus mossambicus | Mozambican Horseshoe Bat |  |
| Rhinolophus nereis | Neriad Horseshoe Bat |  |
| Rhinolophus nippon | Greater Japanese Horseshoe Bat |  |
| Rhinolophus osgoodi | Osgood's Horseshoe Bat |  |
| Rhinolophus pearsonii | Pearson's Horseshoe Bat |  |
| Rhinolophus perditus | Yaeyama Horseshoe Bat |  |
| Rhinolophus perniger | Northern Woolly Horseshoe Bat |  |
| Rhinolophus philippinensis | Large-eared Horseshoe Bat |  |
| Rhinolophus proconsulis | Bornean Woolly Horseshoe Bat | |
| Rhinolophus pumilus | Okinawa Horseshoe Bat |  |
| Rhinolophus pusillus | Least Horseshoe Bat |  |
| Rhinolophus refulgens | Glossy Horseshoe Bat |  |
| Rhinolophus rex | King Horseshoe Bat |  |
| Rhinolophus rhodesiae | Roberts' Horseshoe Bat | |
| Rhinolophus robinsoni | Peninsular Horseshoe Bat |  |
| Rhinolophus rouxii | Rufous Horseshoe Bat |  |
| Rhinolophus rufus | Large Rufous Horseshoe Bat |  |
| Rhinolophus ruwenzorii | Ruwenzori Horseshoe Bat |  |
| Rhinolophus sakejiensis | Sakeji Horseshoe Bat |  |
| Rhinolophus schnitzleri | Schnitzler's Horseshoe Bat |  |
| Rhinolophus sedulus | Lesser Woolly Horseshoe Bat |  |
| Rhinolophus shameli | Shamel's horseshoe bat |  |
| Rhinolophus shortridgei | Shortridge's Horseshoe Bat | |
| Rhinolophus siamensis | Thai Horseshoe Bat |  |
| Rhinolophus silvestris | Forest Horseshoe Bat | |
| Rhinolophus simulator | Bushveld Horseshoe Bat |  |
| Rhinolophus sinicus | Chinese Rufous Horseshoe Bat |  |
| Rhinolophus smithersi | Smithers' Horseshoe Bat |  |
| Rhinolophus stheno | Lesser Brown Horseshoe Bat |  |
| Rhinolophus subbadius | Little Nepalese Horseshoe Bat |  |
| Rhinolophus subrufus | Small Rufous Horseshoe Bat |  |
| Rhinolophus swinnyi | Swinny's Horseshoe Bat |  |
| Rhinolophus tatar | Tatar Horseshoe Bat | |
| Rhinolophus thailandensis | Thailand Horseshoe Bat | |
| Rhinolophus thomasi | Thomas's Horseshoe Bat |  |
| Rhinolophus trifoliatus | Trefoil Horseshoe Bat |  |
| Rhinolophus virgo | Yellow-faced Horseshoe Bat |  |
| Rhinolophus willardi | Willard's Horseshoe Bat |  |
| Rhinolophus xinanzhongguoensis | Southwestern China Horseshoe Bat |  |
| Rhinolophus yunanensis | Dobson's Horseshoe Bat |  |
| Rhinolophus ziama | Ziama Horseshoe Bat |  |